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Detailed motif information

General information
Motif ID: mDDB0167813db002
Number of genes with the motif: 50
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position0123456789
A 0% 0% 0% 0% 0% 0% 0% 67% 0% 33%
C 0% 0% 0% 0% 0% 0% 0% 0% 0% 0%
G 67% 33%100%100% 33% 17%100% 0% 83% 67%
T 33% 67% 0% 0% 67% 83% 0% 33% 17% 0%
consensusKKGGKTGWGR

Matching with known binding sites

1. best match (score: 2.55)
with TRANSFAC motif: HS$APOE_11 - apoE (apolipoprotein E)

         CGGGGGTGAGGCAAGCAGC
          +|++|+++++
          GTGGTTGAGG
          TG  GG TTA
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00173 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
BC4V2_0_00222 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
BC4V2_0_00680 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
BC4V2_0_00984 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
BC4V2_0_01091 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
BC4V2_0_01583 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
BC5V2_0_00822 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
BEC6V2_0_00817 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
BEC6V2_0_01155 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
BEC6V2_0_01324 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC1V2_0_00256 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC1V2_0_00278 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC1V2_0_00312 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC1V2_0_00506 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC1V2_0_00691 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC1V2_0_00724 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC2V2_0_00473 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC2V2_0_00512 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC2V2_0_01559 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC2V2_0_02241 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC2V2_0_02329 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC2V2_0_02912 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC3V2_0_00135 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC3V2_0_00272 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC3V2_0_01179 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC3V2_0_01545 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC3V2_0_01653 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC3V2_0_01665 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
JC3V2_0_01851 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
abcA5 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
apm1 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
csbA dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
dstC dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
ecmD dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
exo70 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
geneDDB0201634 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
geneDDB0229926 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
geneDDB0231588 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
geneDDB0233636 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
geneDDB0233646 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
geneDDB0233835 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
mhcA dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
pccB dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
pks29 dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
ragA dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
rhgB dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
rsmJ dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
stlB dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
syn8B dictyBase Home >> Chromosome 4:423976..429517 >> Gene: DDB_G0283325 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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