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Detailed motif information

General information
Motif ID: mDDB0168344db001
Number of genes with the motif: 155
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position0123456
A 0% 0%100% 29% 0% 29% 0%
C 86% 86% 0% 43% 71% 71%100%
G 14% 14% 0% 0% 0% 0% 0%
T 0% 0% 0% 29% 29% 0% 0%
consensusCCAHYMC

Matching with known binding sites

1. best match (score: 2.76)
with TRANSFAC motif: HS$DBH_03 - DBH (dopamine beta hydroxylase)
bound by: Sp1
      GCCTGGACCCACCCCATTCA
              +++|+++
              CCACCCC
                 TTA 
                 A
2. best match (score: 2.76)
with TRANSFAC motif: MOUSE$EN2_01 - En-2 (engrailed)
bound by: Pax-1, Pax-2.1, Pax-2a, Pax-5, Pax-8
      GGAAGCAGCAGACCGTGCCACCCCGGAGG
                       +++|+++
                       CCACCCC
                          TTA 
                          A
3. best match (score: 2.76)
with TRANSFAC motif: AS$PAX4_54 - artificial sequence.
bound by: Pax-4a
      GAAATCAACCCCTAAGGCCCACCCCACCAT
                        +++|+++
                        CCACCCC
                           TTA 
                           A
4. best match (score: 2.76)
with TRANSFAC motif: CHICK$H5_20 - H5 (histone 5)

      AACCCCACCCCAAT
          +++|+++
          CCACCCC
             TTA 
             A
5. best match (score: 2.76)
with TRANSFAC motif: MOUSE$CD4_04 - CD4 (cell surface glycoprotein)
bound by: MAZ
      AGGAGTCCCTCCCTCCCACCCCCAG
                     +++|+++
                     CCACCCC
                        TTA 
                        A
6. best match (score: 2.76)
with TRANSFAC motif: RAT$PARP_01 - PARP (poly(ADP-ribose) polymerase)

      TGACAGGCGCCACCCCTTTTGT
               +++|+++
               CCACCCC
                  TTA 
                  A
7. best match (score: 2.76)
with TRANSFAC motif: AS$CACCC_01 - artificial sequence.
bound by: CACCC-binding factor
      GATCCCCCACCCCCACCCACCCCCACCCCACCCCCA
            +++|+++
            CCACCCC
               TTA 
               A
8. best match (score: 2.76)
with TRANSFAC motif: HS$MYOGL_01 - Mb (myoglobin)

      ACGCACAACCACCCCACCCCCTGTG
              +++|+++
              CCACCCC
                 TTA 
                 A
9. best match (score: 2.76)
with TRANSFAC motif: HS$GFAP_05 - GFAP (glial fibrillary acidic protein)
bound by: AP-2alphaA, NF-1
      TAGCTGGGCTGCGGCCCAACCCCACCCCCTCA
                           +++|+++
                           CCACCCC
                              TTA 
                              A
10. best match (score: 2.76)
with TRANSFAC motif: HS$GFAP_04 - GFAP (glial fibrillary acidic protein)
bound by: AP-1, AP-2alphaA, NF-1
      AGCAGGCACTGTGCCCACCCCGAACATTGTGTCTGTGCCAAGGTGAGTCATTCA
                    +++|+++
                    CCACCCC
                       TTA 
                       A
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
AP2S1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_00058 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_00173 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_00187 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_00264 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_00899 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_00908 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01022 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01042 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01072 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01091 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01593 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01939 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01988 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_02037 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_00256 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_00323 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_00324 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_00404 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_00471 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_00899 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_01282 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_01551 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_00168 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_00309 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_00691 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_00906 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_00992 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_01080 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_01085 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_01162 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_01323 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_01324 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
HSPC300 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_00256 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_00270 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_00278 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_00506 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_00513 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_00691 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_00724 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_00872 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_01037 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_00466 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_00512 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_00541 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_00563 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_01336 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_01562 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_01672 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_01810 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_01884 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_01952 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_02087 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_02144 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_02292 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_02329 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_02467 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_02505 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_02912 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_03150 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_00135 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_00354 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_00917 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_01125 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_01179 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_01399 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_01545 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_01665 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_01851 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_02127 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_02284 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_02449 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
aarA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
abcA5 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
abcF2 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
abpD dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
ak1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
alfA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
allB2 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
atg9 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
cbpD1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
cbpG dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
colB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
colD dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
cprB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
crlC dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
ctxA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
cytB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
darA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
dcsA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
dscA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
dstC dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
eIF3s5 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
eIF6 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
ecmD dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
exo70 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
fbxA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
fntB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
frmA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
gabT dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
gacX dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
galE dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
gdt7 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0229921 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0229925 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0229926 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0230179 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0231194 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0231388 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0231389 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0231589 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0231652 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0232156 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0232212 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0233055 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0233711 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0233723 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0233920 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0234069 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0234094 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0234118 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0234153 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0234232 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0235170 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0235286 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0237559 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0237763 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0237834 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0237865 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
gpaB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
hemA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
kil1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
masA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
miox dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
mlcB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
mobA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
moe1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
orfR1062 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
pXi dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
pakA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
pccB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
pikF dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
pks29 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
polA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
psmD2 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
rapA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
rasC dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
rhgB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
rsmJ dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
secG dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
thoc2 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
trxD dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
vatM dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
yelA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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