An Online Informatics Resource for Dictyostelium
Search dictyBase:
use * as a wildcard character
Genome Browser
BLAST
dictyMart
Stock Center
Research Tools
Help
Links
Contact Us
Detailed motif information
General information
Motif ID:
mDDB0185522db011
Number of genes with the motif: 63
Motif logo
Sequence logos were rendered with the
Delila Programs
from
Schneider Lab
.
Nucleotide frequency table
position
0
1
2
3
4
5
6
7
8
9
10
11
12
13
14
A
100%
100%
100%
100%
0%
0%
17%
0%
0%
67%
67%
100%
100%
100%
100%
C
0%
0%
0%
0%
50%
17%
0%
0%
17%
0%
0%
0%
0%
0%
0%
G
0%
0%
0%
0%
0%
0%
0%
67%
33%
33%
33%
0%
0%
0%
0%
T
0%
0%
0%
0%
50%
83%
83%
33%
50%
0%
0%
0%
0%
0%
0%
consensus
A
A
A
A
Y
T
T
K
K
R
R
A
A
A
A
Matching with known binding sites
This motif does not match any known binding sites.
Gene expression of all the genes with the motif
Positional distribution of the motif in the regulatory regions of all relevant genes
Links to genes with the motif
Link to results page
Link to detailed gene info
BC4V2_0_01267
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
BC4V2_0_01578
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
BC5V2_0_00023
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
BC5V2_0_00664
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
BC5V2_0_01294
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
BEC6V2_0_00202
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
BEC6V2_0_01341
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
H2AZ
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC1V2_0_00529
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC1V2_0_00530
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC1V2_0_01302
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC2V2_0_01701
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC2V2_0_01740
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC2V2_0_02050
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC2V2_0_02250
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC2V2_0_02449
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC2V2_0_02887
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC3V2_0_00781
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC3V2_0_01921
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
JC3V2_0_02235
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
MF12
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
abcH2
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
abpE
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
adprt3
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
atg5
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
cplA
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
cpsf2
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
dscE
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
dst3
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
empC
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
gacCC
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
gapA
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0230087
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0231493
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0232159
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0232329
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0233269
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0233381
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0233646
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0233767
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0233838
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0235237
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0237658
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
geneDDB0237682
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
gnt6
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
hpd
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
ino1
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
kxcB
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
pdhC
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
phg1b
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
phr2AB
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
prmt1
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
racC
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
rasC
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
rpl34
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
rps20
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
rps26
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
scsA
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
sort1
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
spg1
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
thyB
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
ubcB
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
vatM
dictyBase Home
>>
Chromosome 4:3254828..3256330
>>
Gene: prdx5
>>
Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
Return to Home
Supported by NIH (NIGMS and NHGRI)
Send a Message to the dictyBase Curators