An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

Detailed motif information

General information
Motif ID: mDDB0185522db011
Number of genes with the motif: 63
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position01234567891011121314
A100%100%100%100% 0% 0% 17% 0% 0% 67% 67%100%100%100%100%
C 0% 0% 0% 0% 50% 17% 0% 0% 17% 0% 0% 0% 0% 0% 0%
G 0% 0% 0% 0% 0% 0% 0% 67% 33% 33% 33% 0% 0% 0% 0%
T 0% 0% 0% 0% 50% 83% 83% 33% 50% 0% 0% 0% 0% 0% 0%
consensusAAAAYTTKKRRAAAA

Matching with known binding sites

This motif does not match any known binding sites.

Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_01267 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
BC4V2_0_01578 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
BC5V2_0_00023 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
BC5V2_0_00664 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
BC5V2_0_01294 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
BEC6V2_0_00202 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
BEC6V2_0_01341 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
H2AZ dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC1V2_0_00529 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC1V2_0_00530 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC1V2_0_01302 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC2V2_0_01701 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC2V2_0_01740 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC2V2_0_02050 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC2V2_0_02250 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC2V2_0_02449 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC2V2_0_02887 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC3V2_0_00781 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC3V2_0_01921 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
JC3V2_0_02235 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
MF12 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
abcH2 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
abpE dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
adprt3 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
atg5 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
cplA dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
cpsf2 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
dscE dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
dst3 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
empC dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
gacCC dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
gapA dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0230087 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0231493 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0232159 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0232329 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0233269 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0233381 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0233646 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0233767 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0233838 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0235237 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0237658 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
geneDDB0237682 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
gnt6 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
hpd dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
ino1 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
kxcB dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
pdhC dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
phg1b dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
prmt1 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
racC dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
rasC dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
rpl34 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
rps20 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
rps26 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
scsA dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
sort1 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
spg1 dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
thyB dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
ubcB dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
vatM dictyBase Home >> Chromosome 4:3254828..3256330 >> Gene: prdx5 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.