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Detailed motif information

General information
Motif ID: mDDB0185966db013
Number of genes with the motif: 59
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position01234567891011
A 0% 0% 80% 60% 40% 0% 80%100%100%100%100%100%
C 0% 20% 20% 40% 60% 80% 20% 0% 0% 0% 0% 0%
G 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0%
T100% 80% 0% 0% 0% 20% 0% 0% 0% 0% 0% 0%
consensusTTAMMCAAAAAA

Matching with known binding sites

This motif does not match any known binding sites.

Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00222 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_00380 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_01745 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_02043 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_00415 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_00822 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_01405 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_01426 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_00267 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_00288 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_00675 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_01386 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
CYP508B1 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
CYP519D1 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
DD7-1 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
DG1098 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
DG1105 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_01855 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_02175 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_02444 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_02817 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_03288_b dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_00480 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
abcB1 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
abcB3 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
abcG3 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
cap dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
cnbA dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
ddj1 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
dhkA dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
drkA dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0216390 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0220643 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0230166 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0231412 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0231607 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0232214 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0233339 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0233433 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0234181 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0237581 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0237590 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0237865 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0237901 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
gmd dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
mppB dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
mybN dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
pks16 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
pks44 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
psmC2 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
racI dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
ranA dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
rdiB dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
roco8 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
sec3 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
thoc6 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
udkA dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
udkB dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
vps55 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.