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Detailed motif information

General information
Motif ID: mDDB0186414db013
Number of genes with the motif: 154
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position0123456
A 28% 88% 9% 9% 9% 9% 9%
C 41% 2% 61% 81% 22% 61% 61%
G 22% 2% 2% 2% 2% 2% 2%
T 9% 9% 28% 9% 68% 28% 28%
consensusMAYCTYY

Matching with known binding sites

1. best match (score: 2.24)
with TRANSFAC motif: AS$PAX4_49 - artificial sequence.
bound by: Pax-4a
      GAAGCATTTCAAACAGCTTAATCCACCCCC
                             |+++|++
                             CACCTCC
                             A T CTT
                             G
2. best match (score: 2.24)
with TRANSFAC motif: HS$BG_14 - GLOB-B (beta-globin)

      GCCCCACCCCCGCC
          |+++|++
          CACCTCC
          A T CTT
          G
3. best match (score: 2.24)
with TRANSFAC motif: HS$APOB_15 - apoB (apolipoprotein B)
bound by: AP-2alphaA, C/EBPalpha, CACCC-binding factor, HNF-1alpha, HNF-1alpha-A, HNF-1alpha-B, HNF-1alpha-C, HNF-3, HNF-3, HNF-3, HNF-3beta, Sp1
      ACTTTAACCTTTGTGAAGAAATCGAACCTCCACCCCC
                                    |+++|++
                                    CACCTCC
                                    A T CTT
                                    G
4. best match (score: 2.19)
with TRANSFAC motif: AS$SOX9_B1_72 - artificial sequence.
bound by: Sox9
      GAATTCGCCTCATCCTCTTTGTTAGTCACCCACCTCCCGACAGGATCC
                                    |++++++
                                    CACCTCC
                                    A T CTT
                                    G
5. best match (score: 2.19)
with TRANSFAC motif: AS$ZAP1_28 - artificial sequence.
bound by: ZAP1
      ATCGTTGACCGAGTATCCACCTCCGGATCC
                       |++++++
                       CACCTCC
                       A T CTT
                       G
6. best match (score: 2.19)
with TRANSFAC motif: HS$CAMHC_01 - alpha-MHC (cardiac alpha-myosin heavy chain)
bound by: Hp55, Hp65, p58, RAR-alpha1, RXR-beta, T3R-alpha, T3R-beta1, T3R-beta1, T3R-beta1, T3R-beta2, T3R-beta2
      GCTGTCCTCCTGTCACCTCCAGAGCCAAA
                   |++++++
                   CACCTCC
                   A T CTT
                   G
7. best match (score: 2.19)
with TRANSFAC motif: HS$RARG_01 - RAR-gamma2 (retinoic acid receptor gamma2)
bound by: RAR-alpha1, RAR-beta, RAR-gamma, RXR-alpha
      TCACCTCCTCCTGACCC
       |++++++
       CACCTCC
       A T CTT
       G
8. best match (score: 2.19)
with TRANSFAC motif: HS$GFAP_01 - GFAP (glial fibrillary acidic protein)
bound by: TFIID
      GCAGGATGGAGAGGAGACGCATCACCTCCGCTGCTCGCCG
                            |++++++
                            CACCTCC
                            A T CTT
                            G
9. best match (score: 2.19)
with TRANSFAC motif: HS$GG_27 - GLOB-AG (Agamma-globin)

      GTCCCCACCTCCCC
           |++++++
           CACCTCC
           A T CTT
           G
10. best match (score: 2.19)
with TRANSFAC motif: RAT$AMHC_02 - MHC-A (alpha-myosin heavy chain, cardiac)
bound by: RAR-alpha1, T3R-beta1
      GCTGTCCTCCTGTCACCTCCAGAGCCAA
                   |++++++
                   CACCTCC
                   A T CTT
                   G
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
AY007802 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_00058 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_00173 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_00612 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_00680 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_00892 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_00899 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_01069 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_01385 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_01450 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_01511 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_01535 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_01583 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC4V2_0_02099 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC5V2_0_00246 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC5V2_0_00260 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC5V2_0_00689 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC5V2_0_00876 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC5V2_0_01177 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC5V2_0_01370 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC5V2_0_01503 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC5V2_0_01641 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BC5V2_0_01793 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BEC6V2_0_00143 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BEC6V2_0_00790 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BEC6V2_0_00906 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BEC6V2_0_01085 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BEC6V2_0_01181 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BEC6V2_0_01324 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BEC6V2_0_01378 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
BF4V2_0C0001_00008 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
CRTF dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
CSN5 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
CYP517A1 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
G6PD dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
H2AX dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC1V2_0_00296 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC1V2_0_00371 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC1V2_0_00372 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC1V2_0_00506 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC1V2_0_00595 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC1V2_0_00596 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC1V2_0_00724 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC1V2_0_01053 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC1V2_0_01897 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_00390 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_00408 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_00512 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_00574 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_00595 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_01259 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_01271 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_01298 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_01383 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_01566 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_01679 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_01810 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_01952 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_02072 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC2V2_0_02329 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_00057 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_00272 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_00354 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_00799 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_00813 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_00887 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_01172 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_01470 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_01512 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_01545 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_01653 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_01665 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_01851 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_01907 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_02023 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_02359 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_02449 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
JC3V2_0_02472 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
MGMT dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
abcA5 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
acad8 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
atp5C1 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
bzpP dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
cad2 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
canA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
cbpD1 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
cigA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
colC dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
crlC dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
csaA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
ctxA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
culD dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
cytB dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
dhkK dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
dio3 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
dmtA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
dng1 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
dstC dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
eIF3s5 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
ecmD dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
frmA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
gacI dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
gbfA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
gdt7 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
gefC dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0201634 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0229925 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0230038 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0231194 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0231389 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0231407 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0231559 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0231588 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0231589 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0231658 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0232156 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0232212 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0232258 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0233080 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0233397 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0233528 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0233646 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0233723 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0234118 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0234208 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0235170 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0237559 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0237834 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0238123 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
geneDDB0238132 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
gpaB dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
kil1 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
masA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
mhcA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
mrkA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
ncsA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
orfR1062 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
pccB dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
pdeE dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
ppiA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
psmD2 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
ragA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
rapA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
rasG dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
rhgB dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
rps6 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
rsmJ dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
spnA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
sppA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
stlB dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
tipB dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
uap56 dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
vatM dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
yelA dictyBase Home >> Chromosome 2:55773..58115 >> Gene: AY007802 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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