An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

Detailed motif information

General information
Motif ID: mDDB0187148db011
Number of genes with the motif: 68
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910111213
A 28% 28% 68% 68% 9% 9% 9%100% 20% 0% 60% 0% 20%100%
C 2% 61% 22% 2% 2% 22% 2% 0% 0% 0% 0% 0% 0% 0%
G 61% 2% 2% 2% 2% 41% 81% 0% 0% 40% 0% 0% 20% 0%
T 9% 9% 9% 28% 88% 28% 9% 0% 80% 60% 40%100% 60% 0%
consensusRMAWTKGATKWTTA

Matching with known binding sites

This motif does not match any known binding sites.

Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00117 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BC4V2_0_01035 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BC4V2_0_01174 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BC4V2_0_01482 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BC4V2_0_01565 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BC5V2_0_00488 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BC5V2_0_00692 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BC5V2_0_01354 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BC5V2_0_01355 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BC5V2_0_01445 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BEC6V2_0_00355 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BEC6V2_0_00971 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BEC6V2_0_01296 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
BEC6V2_0_01341 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
CYP522A1 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
DYNC1LI1 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC1V2_0_00465 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC1V2_0_00626 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC1V2_0_01598 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC1V2_0_01880 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC1V2_0_01948 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC2V2_0_00494 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC2V2_0_00551 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC2V2_0_01229 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC2V2_0_01289 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC2V2_0_02541 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC3V2_0_01274 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC3V2_0_01553 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC3V2_0_01676 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC3V2_0_01719 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
JC3V2_0_01840 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
SRP19 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
arcC dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
aslB dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
cbpP dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
clcD dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
cofB dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
crlC dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
cstf3 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
dmtA dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
esd dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
fnkB dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
geneDDB0229937 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
geneDDB0231421 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
geneDDB0232098 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
geneDDB0232104 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
geneDDB0232404 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
geneDDB0233454 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
geneDDB0233464 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
geneDDB0237684 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
geneDDB0237810 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
gnt3 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
gskA dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
mcfZ dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
myoJ dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
ndrB dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
nxnA dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
odhB dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
pks15 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
pks33 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
ppkA dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
psmD10 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
purB dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
rab21 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
rabggtb dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
rasB dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
rcdM dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
vps28 dictyBase Home >> Chromosome 4:290509..295789 >> Gene: DDB_G0283147 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.