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Detailed motif information

General information
Motif ID: mDDB0187476db005
Number of genes with the motif: 54
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678
A100% 67% 83%100% 0%100% 17% 50% 33%
C 0% 33% 17% 0%100% 0% 33% 50% 67%
G 0% 0% 0% 0% 0% 0% 50% 0% 0%
T 0% 0% 0% 0% 0% 0% 0% 0% 0%
consensusAMAACASMM

Matching with known binding sites

1. best match (score: 2.01)
with TRANSFAC motif: MMTV$MMTV_39 - MMTV (mouse mammary tumor virus)
bound by: MAF, NF-1
        AGGACCACAGCCAA
           +||++++++
           AAAACAGCC
            CC   CAA
                 A
2. best match (score: 1.91)
with TRANSFAC motif: BPV1$BPV1_01 - BPV-1 (bovine papilloma virus-1)
bound by: E2
        GAACCACACCCGGTAC
          +||+++|++
          AAAACAGCC
           CC   CAA
                A
3. best match (score: 1.61)
with TRANSFAC motif: RAT$PEPCK_12 - PEPCK (phosphoenolpyruvate carboxykinase, cytosolic)

        TCCCAACATTCATTAACAACAGCAAGTTCAATCATTATCTCC
                       +|++++++|
                       AAAACAGCC
                        CC   CAA
                             A
4. best match (score: 1.50)
with TRANSFAC motif: BPV1$BPV1_20 - BPV-1 (bovine papilloma virus-1)
bound by: E2
        AAAACAGCAGCGGTTC
        ++++++++|
        AAAACAGCC
         CC   CAA
              A
5. best match (score: 1.40)
with TRANSFAC motif: RAT$PEPCK_16 - PEPCK (phosphoenolpyruvate carboxykinase, cytosolic)
bound by: AF-2, HNF-3alpha, HNF-3beta
        GTTGTCAAAACACCA
              ++++++|+|
              AAAACAGCC
               CC   CAA
                    A
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00415 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
BC4V2_0_00565 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
BC4V2_0_01523 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
BC4V2_0_01726 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
BC5V2_0_01370 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
BC5V2_0_01420 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
BC5V2_0_01426 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
BEC6V2_0_00188 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
BEC6V2_0_00605 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC1V2_0_00017 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC1V2_0_00672 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC1V2_0_01318 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC2V2_0_00345 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC2V2_0_01365 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC2V2_0_01922 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC2V2_0_02146 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC2V2_0_02503 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC2V2_0_03148 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC3V2_0_00272 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC3V2_0_00480 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC3V2_0_00907 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC3V2_0_01433 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
JC3V2_0_02011 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
alrE dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
cbpD1 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
dstA dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
expl3 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
gdt9 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
gefQ dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
geneDDB0216387 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
geneDDB0230050 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
geneDDB0231625 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
geneDDB0234027 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
geneDDB0235200 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
geneDDB0235286 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
hmgL dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
manD dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
mhcA dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
numA dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
nup93 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
phdA dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
pikB dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
pks29 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
prsA dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
rab21 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
rab7A dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
repB dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
rngB dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
rpl24 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
rpl26 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
rpl9 dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
rsmD dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
snpC dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
trpS dictyBase Home >> Chromosome 4:1046736..1047381 >> Gene: DDB_G0283737 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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