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Detailed motif information

General information
Motif ID: mDDB0188195db004
Number of genes with the motif: 131
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position0123456
A 0% 0% 40% 0% 60% 0% 0%
C 60% 0% 40%100% 0%100%100%
G 0% 0% 20% 0% 0% 0% 0%
T 40%100% 0% 0% 40% 0% 0%
consensusYTMCWCC

Matching with known binding sites

1. best match (score: 2.44)
with TRANSFAC motif: AS$PAX3_24 - artificial sequence.
bound by: Pax-3
      TCGTCACGTTTACTTTCCCTCTCCACCAT
                          ++|++++
                          CTCCACC
                          T A T  
                            G
2. best match (score: 2.44)
with TRANSFAC motif: AS$PAX3_22 - artificial sequence.
bound by: Pax-3
      TCGTCACGCTTACTTTCCTCTCCACCAT
                         ++|++++
                         CTCCACC
                         T A T  
                           G
3. best match (score: 2.44)
with TRANSFAC motif: AS$PAX3_10 - artificial sequence.
bound by: Pax-3
      TCGTCACGCTTACTTTCCCTCTCCACCAT
                          ++|++++
                          CTCCACC
                          T A T  
                            G
4. best match (score: 2.44)
with TRANSFAC motif: MOUSE$SPIP12_02 - SPI p12 (secretory protease inhibitor p12)
bound by: GC2, GC2, Sp1
      ACAGGCTCCACCCACTGTG
           ++|++++
           CTCCACC
           T A T  
             G
5. best match (score: 2.44)
with TRANSFAC motif: HS$HH1_02 - H1 (histone 1)
bound by: H1TF1, HiNF-B
      GATTGGACGCTCCACCAATCA
               ++|++++
               CTCCACC
               T A T  
                 G
6. best match (score: 2.44)
with TRANSFAC motif: MOUSE$NE_06 - NE (neutrophil elastase)
bound by: PTF1-beta
      GACTTTGGGAAAATCTCCACCTTGCATA
                    ++|++++
                    CTCCACC
                    T A T  
                      G
7. best match (score: 2.44)
with TRANSFAC motif: DIDI$DG17_02 - DG17
bound by: GBF
      AACTCCACCATACCCCCAA
        ++|++++
        CTCCACC
        T A T  
          G
8. best match (score: 2.36)
with TRANSFAC motif: AT$PAL1_02 - PAL1 (phenylalanine ammonia-lyase)
bound by: LIM1
      TCTCAACAACTCCTCCT
               ++|+|++
               CTCCACC
               T A T  
                 G
9. best match (score: 2.36)
with TRANSFAC motif: MOUSE$GLUT2_03 - GLUT2 (glucose transporter 2)

      TGCTCCTCCTCCTCCTACAA
        ++|+|++
        CTCCACC
        T A T  
          G
10. best match (score: 2.36)
with TRANSFAC motif: MOUSE$MYOD_04 - MyoD (myogenic differentiation master gene G558MyoD1)
bound by: COUP-TF2, RXR-alpha, RXR-gamma, T3R-alpha
      TCTACTCCTCCAGCCTGTACTGACCTCAG
          ++|+|++
          CTCCACC
          T A T  
            G
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00086 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_00187 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_00208 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_00389 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_00734 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_00899 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01067 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01069 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01583 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01627 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01830 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01988 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_02099 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_00120 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_00499 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_00743 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_01019 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_01104 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_01416 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_01817 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_01938 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BEC6V2_0_00477 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BEC6V2_0_00605 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BEC6V2_0_00699 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BEC6V2_0_00723 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BEC6V2_0_00809 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BEC6V2_0_00902 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BEC6V2_0_01181 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BF4V2_0C0001_00008 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
CSN4 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
CYP520B1 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_00434 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_00435 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_00505 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_00734 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_00865 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_01153 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_01373 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_01634 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_01698 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_00341 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_00343 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_00434 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_00512 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_00875 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_02453 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_02951 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_02954 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_03281 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_00071 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_00120 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_00455 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_00546 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_00956 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01176 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01189 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01309 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01553 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01560 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01840 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_02177 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_02216 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_02284 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_02449 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
SRE1 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
adprt2 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
ak1 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
atg4 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
bzpP dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
cbpC dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
ccsA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
cprA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
crlC dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
crlD dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
cstf2 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
culB dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
dkc1 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
dscA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
eIF3s5 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
eif2G dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
exo70 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
fnkC dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
fscD dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
gadB dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0201634 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0230005 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0231642 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0232259 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0232942 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233123 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233464 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233513 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233601 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233835 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233868 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0234149 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0235188 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0237731 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0237733 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0237822 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0237841 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0237968 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
gpaK dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
hemB dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
hibA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
limD dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
lvsF dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
mdhC dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
mlcB dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
mybG dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
ndrB dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
nup93 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
pefA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
phbA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
phg1a dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
pks44 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
polA3 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
ppil3 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
psaA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
repE dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
rpl8 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
rps4 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
rpsA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
sdhB dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
sec3 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
sf3a1 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
sgmC dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
tcp1 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
trxD dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
vps32 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
vps33 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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