An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

Detailed motif information

General information
Motif ID: mDDB0188908db006
Number of genes with the motif: 65
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910111213
A 29% 86%100% 29%100% 71% 57% 57% 0% 0% 57% 0% 0% 71%
C 71% 0% 0% 43% 0% 14% 14% 14% 57%100% 43% 86% 86% 0%
G 0% 0% 0% 0% 0% 0% 0% 14% 0% 0% 0% 0% 0% 29%
T 0% 14% 0% 29% 0% 14% 29% 14% 43% 0% 0% 14% 14% 0%
consensusMAAHAAWAYCMCCR

Matching with known binding sites

This motif does not match any known binding sites.

Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00203 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC4V2_0_00625 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC4V2_0_01039 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC4V2_0_01532 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC4V2_0_01781 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC4V2_0_01894 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC4V2_0_01988 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC4V2_0_02046 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC4V2_0_02137 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC5V2_0_00331 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC5V2_0_00499 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC5V2_0_00651 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC5V2_0_00673 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC5V2_0_00822 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC5V2_0_00904 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC5V2_0_01051 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC5V2_0_01288 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BC5V2_0_01291 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BEC6V2_0_00026 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BEC6V2_0_00109 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BEC6V2_0_00168 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BEC6V2_0_01164 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BEC6V2_0_01244 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
BEC6V2_0_01323 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
CSN5 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
CYP522A1 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
DYNC1LI1 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC1V2_0_00734 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC1V2_0_00829 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC1V2_0_01596 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC1V2_0_01598 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_00390 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_00408 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_00939 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_01414 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_02133 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_02250 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_02393 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_02927 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_03281 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC2V2_0_03349 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC3V2_0_00120 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC3V2_0_01851 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
JC3V2_0_02188 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
ak1 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
canA dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
colC dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
dscA dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
exo70 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
forC dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0219997 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0220637 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0229869 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0230172 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0232198 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0233242 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0233507 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0233648 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0233952 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
geneDDB0237660 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
gpaK dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
pkgB dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
sf3a1 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
tagB dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
thoc2 dictyBase Home >> Chromosome 4:500258..508721 >> Gene: DDB_G0283339 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
Return to Home Supported by NIH (NIGMS and NHGRI) Send a Message to the dictyBase Curators