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Detailed motif information

General information
Motif ID: mDDB0191201db001
Number of genes with the motif: 57
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910
A 57% 0% 0% 57% 29% 0% 14% 57% 29% 0% 0%
C 43%100% 86% 43% 29% 86% 57% 43% 43% 57% 29%
G 0% 0% 0% 0% 0% 0% 29% 0% 29% 14% 43%
T 0% 0% 14% 0% 43% 14% 0% 0% 0% 29% 29%
consensusMCCMHCSMVYB

Matching with known binding sites

1. best match (score: 2.55)
with TRANSFAC motif: CHICK$GATA1_11 - GATA1

          CCCCCCCCCCCCCGG
             |++||++||+|
             ACCATCCACCG
             C  CC GCGTT
                 A   A C
2. best match (score: 2.47)
with TRANSFAC motif: HS$CATHD_01 - CATH-D (cathepsin D)
bound by: Sp1
          CCCCCCGCCCGGG
          |++||+|||+|
          ACCATCCACCG
          C  CC GCGTT
              A   A C
3. best match (score: 2.47)
with TRANSFAC motif: MOUSE$R2B_01 - RIIbeta (type IIbeta regulatory subunit of cAMP-dependent protein kinase)
bound by: Sp1
          CCGCCCCCCGCCCGGCGCGCCCCGCCTCCGCCCGCGCG
             |++||+|||+|
             ACCATCCACCG
             C  CC GCGTT
                 A   A C
4. best match (score: 2.32)
with TRANSFAC motif: HS$CREBP1_18 - CRE-BP1 (CRE-binding protein 1)
bound by: Sp1
          TGACAACCCCCGCCCGCTCGC
               +++||+|||+|
               ACCATCCACCG
               C  CC GCGTT
                   A   A C
5. best match (score: 2.31)
with TRANSFAC motif: MOUSE$CMYB_04 - c-myb
bound by: E2F
          CCCCCTCCCGCCAAA
           |++||++||+|
           ACCATCCACCG
           C  CC GCGTT
               A   A C
6. best match (score: 2.17)
with TRANSFAC motif: SV$SV40_63 - SV40 (simian virus 40)
bound by: T-Ag
          CTAACTCCGCCCATCCCGCCCCTAACTCCGCCCAGTTCCGCCCATTCTCCGCCCCATGGC
                   |+++|++||+|
                   ACCATCCACCG
                   C  CC GCGTT
                       A   A C
7. best match (score: 1.90)
with TRANSFAC motif: HS$CMYC_02 - c-myc
bound by: AP-2alphaA, AP-2beta
          CTGAGGACCCCCGAGCTGTGCTG
                +++||+|+|+|
                ACCATCCACCG
                C  CC GCGTT
                    A   A C
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00603 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC4V2_0_00700 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC4V2_0_01091 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC4V2_0_01154 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC4V2_0_01578 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC4V2_0_01781 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC4V2_0_01988 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC5V2_0_00057 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC5V2_0_00323 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC5V2_0_00324 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC5V2_0_00382 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC5V2_0_00822 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC5V2_0_01190 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC5V2_0_01278 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BC5V2_0_01714 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BEC6V2_0_00309 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BEC6V2_0_01025 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BEC6V2_0_01247 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BEC6V2_0_01323 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
BEC6V2_0_01324 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
JC1V2_0_00256 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
JC1V2_0_00270 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
JC1V2_0_00982 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
JC2V2_0_00033 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
JC2V2_0_00512 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
JC2V2_0_01379 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
JC3V2_0_00354 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
JC3V2_0_01840 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
aass dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
abnB dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
cap dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
cbpF dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
dus4l dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
eIF3s5 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
ecmD dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
geneDDB0216435 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
geneDDB0229926 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
geneDDB0230090 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
geneDDB0231746 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
geneDDB0233215 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
geneDDB0233551 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
geneDDB0233646 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
gxcU dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
ino80 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
mppB dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
orfR1062 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
pcp dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
phbA dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
psmC5 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
rpb5 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
sgmB dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
slaA dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
stlB dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
syn1A dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
thoc6 dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
xpot dictyBase Home >> Chromosome 4:1582599..1587662 >> Gene: DDB_G0284157 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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