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Detailed motif information

General information
Motif ID: mDDB0191345db005
Number of genes with the motif: 51
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910
A100% 0% 0% 80% 80% 20% 40% 0% 0% 0% 80%
C 0%100%100% 20% 20% 80% 60% 60% 40% 80% 20%
G 0% 0% 0% 0% 0% 0% 0% 20% 0% 0% 0%
T 0% 0% 0% 0% 0% 0% 0% 20% 60% 20% 0%
consensusACCAACMCYCA

Matching with known binding sites

1. best match (score: 2.31)
with TRANSFAC motif: CHICK$GATA1_08 - GATA1

          CACCCCCCCCCCCCC
           +++||+++|+|
           ACCAACCCTCA
              CCAATCTC
                  G
2. best match (score: 2.28)
with TRANSFAC motif: PV$PAL2_05 - PAL2 (phenylalanine ammonia-lyase 2)
bound by: LIM1
          CTCCACCAACCCCCCTTC
              ++++++++|+|
              ACCAACCCTCA
                 CCAATCTC
                     G
3. best match (score: 2.26)
with TRANSFAC motif: PARS$4CL2_01 - 4CL-2 (4-coumarate-CoA ligase-2)
bound by: LIM1
          CTTTACCAACCCCCATC
              ++++++++|++
              ACCAACCCTCA
                 CCAATCTC
                     G
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00958 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
BC4V2_0_01091 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
BC4V2_0_01387 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
BC4V2_0_01707 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
BC5V2_0_00057 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
BEC6V2_0_00188 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
BEC6V2_0_00309 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
BEC6V2_0_01025 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
BEC6V2_0_01323 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
BEC6V2_0_01324 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
DG1022 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC1V2_0_00256 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC1V2_0_00278 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC1V2_0_00458 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC1V2_0_01222 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC1V2_0_01318 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC1V2_0_01744 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC2V2_0_00939 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC2V2_0_01336 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC2V2_0_01952 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC3V2_0_00585 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC3V2_0_01179 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
JC3V2_0_01851 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
abcA5 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
abcF2 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
alfA dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
cap dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
cbpD1 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
clcD dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
crlC dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
eIF3s5 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
ecmD dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
geneDDB0229925 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
geneDDB0230059 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
geneDDB0231588 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
geneDDB0231746 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
geneDDB0233564 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
geneDDB0234155 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
gxcU dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
ino80 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
mppB dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
orfR1062 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
pks29 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
psmC5 dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
rcnA dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
rhgB dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
rsmJ dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
shkD dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
stlB dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
tipA dictyBase Home >> Chromosome 4:2514923..2515941 >> Gene: DDB_G0284843 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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