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Detailed motif information

General information
Motif ID: mDDB0205447db005
Number of genes with the motif: 63
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910
A 83% 33% 17% 50% 0% 0% 0% 33% 50% 33% 0%
C 17% 67% 67% 50% 50% 33% 50% 67% 50% 67%100%
G 0% 0% 0% 0% 0% 0% 17% 0% 0% 0% 0%
T 0% 0% 17% 0% 50% 67% 33% 0% 0% 0% 0%
consensusAMCMYYYMMMC

Matching with known binding sites

1. best match (score: 2.43)
with TRANSFAC motif: RAT$FN_02 - FN (fibronectin)
bound by: Sp1
          TCCGACTCCCCCCGCCCCTCCTGC
                 |++++||++++
                 ACCCTTCCCCC
                 CATACCTAAA 
                   A   G
2. best match (score: 0.95)
with TRANSFAC motif: AS$AGL3_72 - artificial sequence.
bound by: AGL3
          GGGTGTACATAAAAGGAAAAATCTTGAACCTG
                             +||+++||+++
                             ACCCTTCCCCC
                             CATACCTAAA 
                               A   G
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00222 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_00603 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_00899 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_00984 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_01091 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_01150 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_01154 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_01781 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC4V2_0_01988 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_00057 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_00323 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_00324 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_00822 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_01147 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_01148 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_01278 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BC5V2_0_01623 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_00309 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_00817 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_01025 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_01155 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_01247 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
BEC6V2_0_01323 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
CYP519D1 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC1V2_0_00982 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_01379 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC2V2_0_01559 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_01405 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_01824 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_01840 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
JC3V2_0_02247 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
abnB dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
aslA dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
cap dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
cbpF dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
cofC dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
csbA dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
ecmD dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
gbpD dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
gdt7 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0201634 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0216435 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0230090 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0231194 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0231365 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0231406 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0231729 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0231746 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
geneDDB0233636 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
gxcU dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
ino80 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
mppB dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
pcp dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
phbA dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
psmC5 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
rpb5 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
sgmB dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
sonA dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
stlB dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
syn8B dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
thoc6 dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
xpot dictyBase Home >> Chromosome 4:564142..569491 >> Gene: DDB_G0283357 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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