An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

Detailed motif information

General information
Motif ID: mDDB0215378db002
Number of genes with the motif: 64
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910111213
A 0% 80% 40% 20% 0% 0% 20% 0% 20% 0% 20% 20% 40% 0%
C 60% 0% 0% 0% 0% 0% 0% 0% 0% 0% 40% 60% 40%100%
G 40% 20% 60% 40% 80%100% 60% 80% 80% 80% 0% 20% 0% 0%
T 0% 0% 0% 40% 20% 0% 20% 20% 0% 20% 40% 0% 20% 0%
consensusSARKGGGGGGYCMC

Matching with known binding sites

This motif does not match any known binding sites.

Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00503 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC4V2_0_00617 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC4V2_0_00700 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC4V2_0_00899 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC4V2_0_01091 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC4V2_0_01331 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC4V2_0_01781 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC4V2_0_02012 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC5V2_0_00097 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC5V2_0_00238 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC5V2_0_00822 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BC5V2_0_01190 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BEC6V2_0_01025 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
BEC6V2_0_01296 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
CSN4 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC1V2_0_00270 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC1V2_0_00734 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC1V2_0_01670 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC2V2_0_00337 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC2V2_0_00338 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC2V2_0_00340 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC2V2_0_00341 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC2V2_0_00343 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC2V2_0_02360 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC2V2_0_02505 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC2V2_0_02772 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC2V2_0_03240 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC3V2_0_00354 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC3V2_0_00571 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC3V2_0_00799 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC3V2_0_01170 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
JC3V2_0_02378 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
abcB3 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
abnB dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
act5 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
ahhA dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
bzpP dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
cap dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
cbpF dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
coaA dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
dynD dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
ecd dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
esd dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
geneDDB0229430 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
geneDDB0232155 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
geneDDB0232259 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
geneDDB0233548 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
geneDDB0233551 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
geneDDB0233606 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
geneDDB0235252 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
geneDDB0237767 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
hmgB dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
ino1 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
mppB dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
pcp dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
rapA dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
rcdM dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
rpl23 dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
sgmB dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
sgmD dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
tagB dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
tipA dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
vatM dictyBase Home >> Chromosome 4:1287435..1288962 >> Gene: BC4V2_0_00503 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.