An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

Detailed motif information

General information
Motif ID: mDDB0215668db015
Number of genes with the motif: 17
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position012345678910
A 83% 0%100%100% 50% 83% 0% 83% 33% 0% 0%
C 17% 0% 0% 0% 0% 0% 67% 0% 0% 17% 0%
G 0%100% 0% 0% 50% 0% 0% 17% 0% 0% 0%
T 0% 0% 0% 0% 0% 17% 33% 0% 67% 83%100%
consensusAGAARAYAWTT

Matching with known binding sites

This motif does not match any known binding sites.

Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_01456 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
BC5V2_0_00415 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
BC5V2_0_01380 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
BC5V2_0_01690 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
BEC6V2_0_00818 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
BEC6V2_0_01148 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
JC1V2_0_00248 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
JC1V2_0_00267 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
JC1V2_0_01880 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
JC2V2_0_00219 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
JC3V2_0_01172 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
geneDDB0230205 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
geneDDB0230210 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
geneDDB0231512 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
ndrC dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
pks33 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
rps9 dictyBase Home >> Chromosome 4:3703190..3705615 >> Gene: DDB_G0285823 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
Return to Home Supported by NIH (NIGMS and NHGRI) Send a Message to the dictyBase Curators