An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

Detailed motif information

General information
Motif ID: mDDB0216213db015
Number of genes with the motif: 62
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position0123456789
A 9% 68% 48% 28% 88% 9% 9% 28% 68% 9%
C 41% 2% 41% 61% 2% 22% 61% 41% 22% 81%
G 22% 2% 2% 2% 2% 2% 2% 22% 2% 2%
T 28% 28% 9% 9% 9% 68% 28% 9% 9% 9%
consensusYWMMATYMAC

Matching with known binding sites

1. best match (score: 1.02)
with TRANSFAC motif:
DROME$ADH_30 - Adh (alcohol dehydrogenase)

         GAAAATCACCTGTTAGTT
         |++|+++||+
         CAACATCCAC
         TTCA CTAC 
         G      G  
2. best match (score: 0.88)
with TRANSFAC motif: DROME$PHP_05
bound by: En
         TTCAATCAACT
         ||||+++|++
         CAACATCCAC
         TTCA CTAC 
         G      G  
3. best match (score: 0.69)
with TRANSFAC motif: HS$IAPP_04 - IAPP (islet amyloid polypeptide)
bound by: IPF1
         GGTCATTATTACATTAACTCATCAGT
                 ||++++||++
                 CAACATCCAC
                 TTCA CTAC 
                 G      G  
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00899 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BC4V2_0_01615 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BC4V2_0_01988 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BC5V2_0_00126 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BC5V2_0_00465 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BC5V2_0_00568 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BC5V2_0_00745 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BC5V2_0_01677 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BC5V2_0_01975 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BEC6V2_0_00109 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
BEC6V2_0_01244 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC1V2_0_00636 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC1V2_0_00724 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC1V2_0_01056 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC1V2_0_01919 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC2V2_0_00345 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC2V2_0_00387 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC2V2_0_00512 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC2V2_0_01740 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC2V2_0_01774 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC2V2_0_02912 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC2V2_0_03221 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC3V2_0_00135 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC3V2_0_00313 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC3V2_0_00813 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC3V2_0_00907 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC3V2_0_01179 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC3V2_0_01206 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC3V2_0_01851 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC3V2_0_02113 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
JC3V2_0_02378 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
SRPR dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
abcA5 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
abcD2 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
arpD dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
calB dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
canA dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
cbpC dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
colC dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
comG dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
csaA dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
exo70 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
fscD dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0220498 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0230165 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0230202 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0231420 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0231544 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0232937 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0235170 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0235315 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0237733 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
geneDDB0237900 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
helE dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
ints6 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
odhB dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
pks15 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
plbE dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
psmD2 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
ranbp1 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
rasG dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
uap56 dictyBase Home >> Chromosome 4:2358575..2359096 >> Gene: DDB_G0284693 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.