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Detailed motif information

General information
Motif ID: mDDB0217976db001
Number of genes with the motif: 68
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position01234567891011121314
A 0% 50% 17% 50% 0% 33% 0% 67% 33% 0%100% 0% 67% 17%100%
C 33% 0% 0% 0% 0% 0% 17% 0% 0% 0% 0% 0% 0% 0% 0%
G 33% 0% 67% 50% 67% 50% 83% 17% 67%100% 0% 83% 0% 83% 0%
T 33% 50% 17% 0% 33% 17% 0% 17% 0% 0% 0% 17% 33% 0% 0%
consensusBWGRKRGARGAGWGA

Matching with known binding sites

1. best match (score: 2.25)
with TRANSFAC motif: HS$APOB_26 - apoB (apolipoprotein B)

              GTGCTGGGGGAGGAGAGAGAAGG
                 |++++++++++++++
                 TTGGGGGAGGAGAGA
                 GATATACTA  TTA 
                 C A  T G
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
AP2S1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
AY007802 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_00398 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_00700 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_00734 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01022 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01174 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01273 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01597 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_01830 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC4V2_0_02093 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_00280 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_00426 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_00758 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_01454 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_01695 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BC5V2_0_01798 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_00026 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_00315 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
BEC6V2_0_01324 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
CYP517A1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
CYP522A1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_00248 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_01405 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC1V2_0_01493 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_01356 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC2V2_0_02444 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_00161 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_00325 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_00821 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_00910 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_00956 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_01309 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_01412 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_01941 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_02336 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
JC3V2_0_02455 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
Unc104 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
carB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
cenA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
csaA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
eIF2a dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
fnkC dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
gacV dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
gcvH2 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
gefQ dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0216422 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0232224 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0233339 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0234104 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0237662 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
geneDDB0237901 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
hatB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
lis1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
mai dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
mccA dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
ndrB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
odhB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
pccB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
pfdn3 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
phr2AB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
pitB dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
plip dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
qdpr dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
rab7A dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
rps20 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
sf3a1 dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
vti1A dictyBase Home >> Chromosome 5:3163579..3164546 >> Gene: AP2S1 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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