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Detailed motif information

General information
Motif ID: mDDB0219867db013
Number of genes with the motif: 89
Motif logo

Sequence logos were rendered with the Delila Programs from Schneider Lab.
Nucleotide frequency table
position0123456
A 0% 43% 14%100% 57% 0% 0%
C 86% 57% 71% 0% 29%100% 0%
G 14% 0% 14% 0% 0% 0% 0%
T 0% 0% 0% 0% 14% 0%100%
consensusCMCAMCT

Matching with known binding sites

1. best match (score: 2.39)
with TRANSFAC motif: AS$AREB6_14 - artificial sequence.
bound by: ZEB (1124 AA)
      TCCCACCTGAGT
       ++++|++
       CCCAACT
        A  C
2. best match (score: 2.39)
with TRANSFAC motif: PV$PAL2_02 - PAL2 (phenylalanine ammonia-lyase 2)
bound by: RF2a
      CCCACCTACCA
      ++++|++
      CCCAACT
       A  C
3. best match (score: 2.39)
with TRANSFAC motif: DROME$SIM_01 - sim (single-minded)
bound by: Sn
      CCCACCTGATAGGA
      ++++|++
      CCCAACT
       A  C
4. best match (score: 2.39)
with TRANSFAC motif: HS$CSB_02 - CS-B (placental lactogen, chorionic somatomamotropin, hCS-2)
bound by: T3R-alpha, T3R-alpha
      TCCCTGCTTGACCCCACCTG
                  ++++|++
                  CCCAACT
                   A  C
5. best match (score: 2.39)
with TRANSFAC motif: AD$MLP_28 - MLP (major late promoter)

      GCGCACCACCATTTTCCCCACCTGGAAATGCCT
                      ++++|++
                      CCCAACT
                       A  C
6. best match (score: 2.39)
with TRANSFAC motif: MOUSE$A1ANTR_01 - AAT (alpha1-antitrypsin)
bound by: C/EBPalpha, C/EBPalpha
      GAGTAGGTTATGTGCCCACCTGACG
                    ++++|++
                    CCCAACT
                     A  C
7. best match (score: 2.22)
with TRANSFAC motif: DROME$U1SNRNA95CA_01

      TTCGTTGCAATTCCCAACTGGTTTTAGCTGCTCAGCCA
                  +++++++
                  CCCAACT
                   A  C
8. best match (score: 2.22)
with TRANSFAC motif: Y$ACS1_02 - ACS1 (acetyl CoA synthetase)
bound by: ADR1
      CCCCAACTGCAATACCCATTGAATAATGGCATCGGAG
       +++++++
       CCCAACT
        A  C
9. best match (score: 2.22)
with TRANSFAC motif: RAT$SGK_01 - sgk (serum/glucocorticoid-inducible serine/threonine kinase)
bound by: p53
      CCTGCCCAACTCAGGCTGCCTCCTGCGACTTGCCT
          +++++++
          CCCAACT
           A  C
10. best match (score: 2.22)
with TRANSFAC motif: HS$PDGFA_03 - PDGF, A-chain (platelet-derived growth factor A-chain)
bound by: Sp1
      GGAGCCCGCCCAACTCCG
              +++++++
              CCCAACT
               A  C
Gene expression of all the genes with the motif

Positional distribution of the motif in the regulatory regions of all relevant genes

Links to genes with the motif
Link to results pageLink to detailed gene info
BC4V2_0_00086 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_00888 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01251 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01436 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01568 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01654 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC4V2_0_01939 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_00382 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_00673 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_00689 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_01380 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BC5V2_0_01416 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BEC6V2_0_00061 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
BEC6V2_0_01324 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
CYP515B1 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
DidioMp21 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
EFTUD1 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_00278 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_00296 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_00312 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_00871 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_01153 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_01596 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC1V2_0_01641 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_00494 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_01348 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_01365 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_01652 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_01761 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_01961 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_02292 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_02369 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC2V2_0_02453 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_00543 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_00571 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01275 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01298 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01585 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_01909 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
JC3V2_0_02126 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
alyB dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
apm3 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
bzpP dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
carD dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
cbpC dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
cct6 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
cf60 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
cog7 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
cryS dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
forD dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
gbpD dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0220097 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0220470 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0220659 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0231365 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0231388 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0231412 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0231438 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0231577 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0232093 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0232156 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0232173 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0232209 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0232942 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233098 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233584 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233675 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0233809 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0237767 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0237823 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
geneDDB0237967 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
grlE dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
gsr dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
hbx2 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
limD dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
lsm5 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
miox dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
mpgA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
mrpl11 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
prsB dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
psiA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
rheb dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
rps20 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
rps3 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
sgmD dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
snrpA1 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
sonA dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
syn8B dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
vps5 dictyBase Home >> Chromosome 4:206428..208370 >> Gene: DDB_G0283091 >> Regulatory Region
Query for a group of genes. Learn about how the analysis was done.
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