An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

The regulatory region of DDB_G0286063

dictyBase Home >> Chromosome 4:4014099..4015660 >> Gene: DDB_G0286063 >> Regulatory Region
Regulatory region snapshot
Description of the computationally inferred structure of gene regulatory sequence elements

Motif appears at position -1000 to -281 relative to the ATG AND
motif appears in sense direction at position -920 to -401 relative to the ATG.

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
AAGGAAC|CCTTCCCCACC|CAACACG (BC4V2_0_01578) in nonsense dir., at pos. -903, p: 1.94e-08
This motif matches the following known binding sites:
  • MOUSE$GLUT2_03 - GLUT2 (glucose transporter 2)
  • HS$CD11B_02 - CD11b (leukocyte (myeloid) integrin CD11b), bound by: PU.1, PU.1
  • see details about this motif
    • Motif appears at these position(s): 
    TCGTGTT|GGGTGGGGAAGGGTT|CCTTTAA (BC4V2_0_01578) in sense dir., at pos. -904, p: 2.58e-11

    This motif does not match any known binding sites.

    Explore this gene further
  • List all inferred regulatory region structures that include this gene using pufA- data.
  • Look at genes with similar expression patterns and regulatory domain structure.
  • This regulatory region structure was inferred using pufA- gene expression data. Look at structures inferred using other data (click on the panel with the gene expression of interest below).


    • Query for a group of genes. Learn about how the analysis was done.
    Return to Home Supported by NIH (NIGMS and NHGRI) Send a Message to the dictyBase Curators