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The regulatory region of rasS

dictyBase Home >> Chromosome 4:849876..850576 >> Gene: rasS >> Regulatory Region
Regulatory region snapshot
Description of the computationally inferred structure of gene regulatory sequence elements

Motif appears at position -1000 to -641 relative to the ATG AND
motif appears at position -960 to -361 relative to the ATG AND
motif appears in nonsense direction at position -960 to -761 relative to the ATG.

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
TTTATTT|GAAGAAGTGG|AAATTAG (rasS) in nonsense dir., at pos. -932, p: 2.64e-07
This motif matches the following known binding sites:
  • MOUSE$CRISP1_03 - CRISP1 (cystein-rich secretory protein 1), bound by: AR
  • see details about this motif
    • Motif appears at these position(s): 
    TCTAATT|TCCACTTCTTC|AAATAAA (rasS) in sense dir., at pos. -933, p: 5.87e-08

    This motif does not match any known binding sites.

    Explore this gene further
  • List all inferred regulatory region structures that include this gene using pufA- data.
  • Look at genes with similar expression patterns and regulatory domain structure.
  • This regulatory region structure was inferred using pufA- gene expression data. Look at structures inferred using other data (click on the panel with the gene expression of interest below).


    • Query for a group of genes. Learn about how the analysis was done.
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