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The regulatory region of abpE-1

dictyBase Home >> Chromosome 2:2970239..2972376 >> Gene: abpE-1 >> Regulatory Region
Regulatory region snapshot
Description of the computationally inferred structure of gene regulatory sequence elements

Motif appears anywhere in the regulatory region AND
motif appears at position -600 to -41 relative to the ATG.

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
TATTCAA|GAGTGATGATG|TGTTTGA (abpE) in sense dir., at pos. -897, p: 3.24e-07
This motif matches the following known binding sites:
  • NEUCR$QAY_03 - qa-y (quinic acid gene cluster, qa-y gene), bound by: qa-1F
  • see details about this motif
    • Motif appears at these position(s): 
    TTACCTT|TATCAACACAA|CCAACAA (abpE) in sense dir., at pos. -276, p: 1.82e-06
    This motif matches the following known binding sites:
  • AD5$E1A_30 - E1A (early gene 1A)
  • DROME$TSH_01, bound by: Ubx
  • see details about this motif
    • Explore this gene further
  • List all inferred regulatory region structures that include this gene using pufA- data.
  • Look at genes with similar expression patterns and regulatory domain structure.
  • This regulatory region structure was inferred using pufA- gene expression data. Look at structures inferred using other data (click on the panel with the gene expression of interest below).


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