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Listed are 2 possible structures of the regulatory region inferred using pufA- gene expression data.
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Motif  appears in sense direction at position -600 to -481 relative to the ATG.
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Motif appears at these position(s):
AAATATT|CCCACCT|TCATTAA (BC4V2_0_00086) in sense dir., at pos. -491, p: 5.22e-07
This motif matches the following known binding sites:
AS$AREB6_14 - artificial sequence., bound by: ZEB (1124 AA)
PV$PAL2_02 - PAL2 (phenylalanine ammonia-lyase 2), bound by: RF2a
see details about this motif
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Look at genes with similar expression patterns and regulatory domain structure.
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Motif  appears at position -1000 to -201 relative to the ATG AND
motif  appears at position -1000 to -281 relative to the ATG.
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Motif appears at these position(s):
TAAAGAG|CCTGGCAAAT|TCGATGT (BC4V2_0_00086) in sense dir., at pos. -835, p: 1.36e-06
This motif matches the following known binding sites:
MMTV$MMTV_49 - MMTV (mouse mammary tumor virus), bound by: SXR
RAT$BCAS_11 - B-CAS (beta-casein)
see details about this motif
Motif appears at these position(s):
TCGAATT|TGCCAGG|CTCTTTA (BC4V2_0_00086) in nonsense dir., at pos. -835, p: 1.57e-06
This motif matches the following known binding sites:
RAT$SSTA_06 - SOM (somatostatin), bound by: Pax-4a, Pax-6
DROME$DFD_05, bound by: Exd
see details about this motif
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Look at genes with similar expression patterns and regulatory domain structure.
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