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Genes with similar expression patterns and regulatory domain structures

Description of the computationally inferred structure of gene regulatory sequence elements
There are 17 genes that match this regulatory region structure and are co-regulated in the pufA- gene expression data:

Motif appears at position -800 to -241 relative to the ATG AND
motif appears in nonsense direction at position -720 to -41 relative to the ATG.

Regulatory region snapshot
BC5V2_0_00257 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
BC5V2_0_01840 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
CYP516A1 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
JC1V2_0_00935 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
JC1V2_0_01174 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
JC2V2_0_00574 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
JC2V2_0_02050 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
JC2V2_0_03048 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
JC2V2_0_03270 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
JC3V2_0_00764 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
geneDDB0235316 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
geneDDB0235323 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
psmC4 ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
pteN ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
purB ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
rcdII ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )
syn8B ( dictyBase Home >> Chromosome 5:616000..616777 >> Gene: DDB_G0287731 >> Regulatory Region )

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
GAAATGA|GTGAAACAAAAG|AAAGATC (psmC4) in nonsense dir., at pos. -711, p: 6.1e-08
GTTGTTA|GTGACATAAGTG|TGTTATT (CYP516A1) in nonsense dir., at pos. -692, p: 2.59e-06
AAAATTG|GTGAGACCAGAA|ATAAAAA (JC1V2_0_01174) in nonsense dir., at pos. -675, p: 2.59e-06
GGGACAA|GTAAGATAAGAG|GTATTTT (geneDDB0235323) in nonsense dir., at pos. -615, p: 2.97e-06
AAAAGAA|GTGAAACAAAAA|AAAAAAA (JC2V2_0_03270) in nonsense dir., at pos. -613, p: 8.92e-07
TAGATTG|GTGAAAAAAGAG|AGAAAGA (geneDDB0235316) in nonsense dir., at pos. -607, p: 3.32e-06
CAAATTT|GTGAGATAAAAA|AAAAAAA (BC5V2_0_00257) in nonsense dir., at pos. -606, p: 1.66e-06
TTTTAAA|GTGAAGCAAAAG|CTAAAGC (purB) in nonsense dir., at pos. -584, p: 1.98e-06
AGAATTT|GGGAGACAAGAA|CAATTAA (JC1V2_0_00935) in nonsense dir., at pos. -569, p: 2.59e-06
ATAATTT|GTAAAACAAAAG|TGGGGGT (BC5V2_0_01840) in nonsense dir., at pos. -539, p: 2.36e-06
TCTGATG|GGGAAACAAGAG|AAAAAAA (JC2V2_0_00574) in nonsense dir., at pos. -536, p: 1.14e-06
AAAAAGG|GTGAAACAAAAA|TAGGTTA (JC3V2_0_00764) in nonsense dir., at pos. -491, p: 8.92e-07
AAAAAAA|GTGAAAAAAGAG|AAAAAAA (pteN) in nonsense dir., at pos. -438, p: 3.32e-06
GCTTTAG|GTGAAACAAATG|CTATTAT (rcdII) in sense dir., at pos. -414, p: 1.98e-06
AAATTAT|GTGAGAAAAGAG|TATTTCA (JC2V2_0_03048) in nonsense dir., at pos. -344, p: 1.17e-06
TGTGTCA|GTGAAACAGAAG|GATGTGT (JC2V2_0_02050) in nonsense dir., at pos. -334, p: 1.98e-06
AAAAAGA|GTGAGATAAGAA|TAAAAAA (syn8B) in nonsense dir., at pos. -258, p: 1.04e-06
ATAAATT|GAGAAACAAAAG|TTTGTAA (rcdII) in nonsense dir., at pos. -60, p: 1.98e-06

This motif does not match any known binding sites.

Group gene expression

Here you can see all gene expression profiles data for all genes in this group.


Query for a group of genes. Learn about how the analysis was done.
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