An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

The regulatory region of bzpL

dictyBase Home >> Chromosome 4:1448918..1450978 >> Gene: bzpL >> Regulatory Region
Regulatory region snapshot
Description of the computationally inferred structure of gene regulatory sequence elements

Motif appears at position -920 to -121 relative to the ATG AND
motif appears at position -320 to -41 relative to .

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
CGTCAAC|GCCACC|GCATCAA (bzpL) in sense dir., at pos. -214, p: 1.24e-06
This motif matches the following known binding sites:
  • DROME$ZEN_17, bound by: Mad
  • Y$RPT5_01 - RPT5 (probable 26S protease subunit ), bound by: RPN4
  • see details about this motif
    • Motif appears at these position(s): 
    TTTCACT|GGGGATTTCCC|ATTCACT (bzpL) in sense dir., at pos. -523, p: 2.37e-08
    This motif matches the following known binding sites:
  • SV$SV40_38 - SV40 (simian virus 40), bound by: NF-kappaB, NP-TCII, NP-TCII, p300, p50
  • MOUSE$IGKL_01 - Ig-kappa (immunoglobulin kappa light chain), bound by: NF-kappaB, NF-kappaB, p50
  • see details about this motif
    • Explore this gene further
  • List all inferred regulatory region structures that include this gene using yakA- pufA- data.
  • Look at genes with similar expression patterns and regulatory domain structure.
  • This regulatory region structure was inferred using yakA- pufA- gene expression data. Look at structures inferred using other data (click on the panel with the gene expression of interest below).


    • Query for a group of genes. Learn about how the analysis was done.
    Return to Home Supported by NIH (NIGMS and NHGRI) Send a Message to the dictyBase Curators