An Online Informatics Resource for Dictyostelium
  Search dictyBase:
use * as a wildcard character
Genome Browser BLAST dictyMart Stock Center Research Tools Help Links Contact Us

The regulatory region of geneDDB0233731

dictyBase Home >> Chromosome 2:6853200..6857459 >> Gene: geneDDB0233731 >> Regulatory Region
Regulatory region snapshot
Description of the computationally inferred structure of gene regulatory sequence elements

Motif appears at position -520 to -1 relative to the ATG AND
motif appears at position -840 to -321 relative to the ATG.

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
ATAGAAT|CATTCCCACACAAAA|ACCAAAC (geneDDB0233731) in sense dir., at pos. -489, p: 9.39e-08

This motif does not match any known binding sites.

Motif appears at these position(s): 
AAAACCA|AACACACATAAATAG|AAATTTT (geneDDB0233731) in sense dir., at pos. -470, p: 1.5e-06
This motif matches the following known binding sites:
  • PARS$PR12_01 - PR1-2 (pathogen related protein 1-2), bound by: WRKY1, WRKY2, WRKY3
  • CHICK$HOX14_01 - Chox-1.4, bound by: HOXA4
  • see details about this motif
    • Explore this gene further
  • List all inferred regulatory region structures that include this gene using yakA- pufA- data.
  • Look at genes with similar expression patterns and regulatory domain structure.
  • This regulatory region structure was inferred using yakA- pufA- gene expression data. Look at structures inferred using other data (click on the panel with the gene expression of interest below).


    • Query for a group of genes. Learn about how the analysis was done.
    Return to Home Supported by NIH (NIGMS and NHGRI) Send a Message to the dictyBase Curators