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Genes with similar expression patterns and regulatory domain structures

Description of the computationally inferred structure of gene regulatory sequence elements
There are 7 genes that match this regulatory region structure and are co-regulated in the yakA- pufA- gene expression data:

Motif appears in sense direction at position -1000 to -881 relative to the ATG.

Regulatory region snapshot
BC4V2_0_00086 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
BC4V2_0_01209 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
BC5V2_0_01946 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
JC2V2_0_01295 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
psmE3 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
rpl31 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
slob1 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
TATATAG|GGTTCCCATATGG|GTCATGT (BC5V2_0_01946) in sense dir., at pos. -987, p: 6.66e-07
CACGACC|GGTTACCAATTGG|AATGGAC (slob1) in nonsense dir., at pos. -970, p: 9.7e-08
ATGATAT|GGATCCACGTTGG|TCTGAAA (rpl31) in sense dir., at pos. -970, p: 4.94e-07
TCCAATT|GGTAACCGGTCGT|GTTTGGA (slob1) in sense dir., at pos. -964, p: 3.74e-07
CAGTATT|GGTACCAGGTTGT|GATGAAA (BC4V2_0_01209) in sense dir., at pos. -963, p: 1.45e-07
TGACACC|GACCACCAGTTGT|TACAATT (JC2V2_0_01295) in sense dir., at pos. -955, p: 2.86e-07
AATGTCA|GGCTACCCATTAG|AAAATAT (BC4V2_0_00086) in sense dir., at pos. -952, p: 1.85e-07
AAGTATT|GGACCCCCGATAG|AATTGGT (psmE3) in sense dir., at pos. -913, p: 2.62e-07

This motif does not match any known binding sites.

Group gene expression

Here you can see all gene expression profiles data for all genes in this group.


Query for a group of genes. Learn about how the analysis was done.
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