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Genes with similar expression patterns and regulatory domain structures

Description of the computationally inferred structure of gene regulatory sequence elements
There are 7 genes that match this regulatory region structure and are co-regulated in the yakA- pufA- gene expression data:

Motif appears at position -920 to -1 relative to the ATG AND
motif appears at position -400 to -81 relative to the ATG.

Regulatory region snapshot
BC4V2_0_01482 ( dictyBase Home >> Chromosome 4:3762817..3765008 >> Gene: DDB_G0285879 >> Regulatory Region )
BEC6V2_0_00738 ( dictyBase Home >> Chromosome 4:3762817..3765008 >> Gene: DDB_G0285879 >> Regulatory Region )
JC1V2_0_01493 ( dictyBase Home >> Chromosome 4:3762817..3765008 >> Gene: DDB_G0285879 >> Regulatory Region )
JC2V2_0_00945 ( dictyBase Home >> Chromosome 4:3762817..3765008 >> Gene: DDB_G0285879 >> Regulatory Region )
JC2V2_0_01142 ( dictyBase Home >> Chromosome 4:3762817..3765008 >> Gene: DDB_G0285879 >> Regulatory Region )
geneDDB0231420 ( dictyBase Home >> Chromosome 4:3762817..3765008 >> Gene: DDB_G0285879 >> Regulatory Region )
gnt13 ( dictyBase Home >> Chromosome 4:3762817..3765008 >> Gene: DDB_G0285879 >> Regulatory Region )

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
TTCTTCT|CATACACACCACA|CACACAC (gnt13) in sense dir., at pos. -880, p: 8.15e-08
AAATGAA|CAACCAAACCCAA|AAAAAAA (JC2V2_0_00945) in sense dir., at pos. -336, p: 2.63e-08
ATTAAAA|CAAACACACCCAA|ATTTGTA (JC2V2_0_01142) in sense dir., at pos. -312, p: 2.63e-08
TTTTTCC|CAAACACACCACA|AATTAAA (geneDDB0231420) in nonsense dir., at pos. -277, p: 2.63e-08
TCACCCG|CAAACACACCAAA|TACACAC (BC4V2_0_01482) in sense dir., at pos. -215, p: 5.04e-08
CATCACA|CAAACACACCACA|ATAGCAA (BEC6V2_0_00738) in sense dir., at pos. -107, p: 2.63e-08
CATACTA|CAACCTCACCAAA|TAAAATA (JC1V2_0_01493) in sense dir., at pos. -83, p: 1.35e-09

This motif does not match any known binding sites.

Motif appears at these position(s): 
ACAACCA|CAAACTCACCC|ACTTTTA (gnt13) in sense dir., at pos. -371, p: 1.93e-08
AAATGAA|CAACCAAACCC|AAAAAAA (JC2V2_0_00945) in sense dir., at pos. -336, p: 1.2e-08
ATTAAAA|CAAACACACCC|AAATTTG (JC2V2_0_01142) in sense dir., at pos. -312, p: 3.52e-08
TTTTTCC|CAAACACACCA|CAAATTA (geneDDB0231420) in nonsense dir., at pos. -275, p: 2.91e-07
TCACCCG|CAAACACACCA|AATACAC (BC4V2_0_01482) in sense dir., at pos. -215, p: 2.91e-07
CATCACA|CAAACACACCA|CAATAGC (BEC6V2_0_00738) in sense dir., at pos. -107, p: 2.91e-07
CATACTA|CAACCTCACCA|AATAAAA (JC1V2_0_01493) in sense dir., at pos. -83, p: 1.93e-08

This motif does not match any known binding sites.

Group gene expression

Here you can see all gene expression profiles data for all genes in this group.


Query for a group of genes. Learn about how the analysis was done.
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