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Genes with similar expression patterns and regulatory domain structures

Description of the computationally inferred structure of gene regulatory sequence elements
There are 6 genes that match this regulatory region structure and are co-regulated in the yakA- pufA- gene expression data:

Motif appears in sense direction at position -720 to -161 relative to the ATG.

Regulatory region snapshot
BC4V2_0_01939 ( dictyBase Home >> Chromosome 4:4933185..4934787 >> Gene: DDB_G0286757 >> Regulatory Region )
BC5V2_0_00849 ( dictyBase Home >> Chromosome 4:4933185..4934787 >> Gene: DDB_G0286757 >> Regulatory Region )
BEC6V2_0_00910 ( dictyBase Home >> Chromosome 4:4933185..4934787 >> Gene: DDB_G0286757 >> Regulatory Region )
JC3V2_0_02294 ( dictyBase Home >> Chromosome 4:4933185..4934787 >> Gene: DDB_G0286757 >> Regulatory Region )
eifE ( dictyBase Home >> Chromosome 4:4933185..4934787 >> Gene: DDB_G0286757 >> Regulatory Region )
rps15 ( dictyBase Home >> Chromosome 4:4933185..4934787 >> Gene: DDB_G0286757 >> Regulatory Region )

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
TAATATT|CTCAACGAA|ATAGATA (BC5V2_0_00849) in sense dir., at pos. -712, p: 1.09e-06
TATCAAG|CGCAACAAA|TAAATTA (BC4V2_0_01939) in sense dir., at pos. -637, p: 1.09e-06
AAAGTAT|CTCAACGAA|ATTGTGT (eifE) in sense dir., at pos. -492, p: 1.09e-06
CTATCTA|CGCAACAAA|AAAAAAA (JC3V2_0_02294) in sense dir., at pos. -480, p: 1.09e-06
AAAACAT|CGCAACAAA|AATAAAA (BEC6V2_0_00910) in sense dir., at pos. -273, p: 1.09e-06
AATTTTT|CGCAACAAA|ACTTTTT (rps15) in sense dir., at pos. -199, p: 1.09e-06
This motif matches the following known binding sites:
  • Y$ERG11_03 - ERG11 (lanosterol 14alpha-demethylase)
  • HT1$HTLV1_23 - HTLV-I (human T-cell lymphotropic virus type I), bound by: c-Myb
  • see details about this motif
    • Group gene expression

    Here you can see all gene expression profiles data for all genes in this group.


    Query for a group of genes. Learn about how the analysis was done.
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