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Genes with similar expression patterns and regulatory domain structures

Description of the computationally inferred structure of gene regulatory sequence elements
There are 9 genes that match this regulatory region structure and are co-regulated in the yakA- pufA- gene expression data:

Motif appears in nonsense direction at position -480 to -201 relative to the ATG.

Regulatory region snapshot
BC4V2_0_00086 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
BC4V2_0_01017 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
BEC6V2_0_00564 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
DG1105 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
geneDDB0232949 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
geneDDB0233476 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
geneDDB0235395 ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
sglA ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )
trfA ( dictyBase Home >> Chromosome 4:206567..208231 >> Gene: DDB_G0283091 >> Regulatory Region )

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
CAAATTT|CTTTATAACCCCTTT|TTTTTTT (BC4V2_0_01017) in nonsense dir., at pos. -462, p: 2.04e-06
TTTTTTT|CAAAAATTTCTCGTT|TCGTCGG (geneDDB0232949) in nonsense dir., at pos. -455, p: 2.21e-06
AAGGTTA|GTATATAATCTAGTT|TTGAACA (trfA) in nonsense dir., at pos. -453, p: 4.4e-06
AACTATT|CTTTAAATCCCAGTG|CTTTTCC (geneDDB0233476) in nonsense dir., at pos. -445, p: 1.45e-07
TTGAATT|GAATATCATCGAGTG|TACCATC (BC4V2_0_00086) in nonsense dir., at pos. -435, p: 8.86e-07
TATTGTG|CTATAAAACCTAGTG|ATATTTA (DG1105) in nonsense dir., at pos. -377, p: 6.36e-07
ATTTTTT|CTTTAATTTCCCTTT|TTTTTTT (BEC6V2_0_00564) in nonsense dir., at pos. -350, p: 2.41e-06
GAACCGA|GATTATTATCGCGTT|ATTTTAA (sglA) in nonsense dir., at pos. -232, p: 2.04e-06
AATGACG|CTTTAATACCTCTTT|AATTTCA (geneDDB0235395) in nonsense dir., at pos. -201, p: 3.71e-06

This motif does not match any known binding sites.

Group gene expression

Here you can see all gene expression profiles data for all genes in this group.


Query for a group of genes. Learn about how the analysis was done.
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