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The regulatory region of DDB_G0281679

dictyBase Home >> Chromosome 3:4803930..4805339 >> Gene: DDB_G0281679 >> Regulatory Region
Regulatory region snapshot
Description of the computationally inferred structure of gene regulatory sequence elements

Motif appears at position -1000 to -1 relative to the ATG AND
motif appears at position -960 to -641 relative to the ATG.

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
TTTTTTT|CCTTTTTCTCTCTT|TTTATTT (JC3V2_0_01921) in nonsense dir., at pos. -961, p: 2.48e-07
This motif matches the following known binding sites:
  • HS$APOB_02 - apoB (apolipoprotein B), bound by: C/EBPalpha
  • see details about this motif
    • Motif appears at these position(s): 
    TTATTGA|GGCGCAGGGG|AGTGTAC (JC3V2_0_01921) in nonsense dir., at pos. -912, p: 1.27e-10
    This motif matches the following known binding sites:
  • MOUSE$SURF2_01 - Surf-2 (Surfeit), bound by: ATF, TF68
  • MOUSE$PCNA_02 - PCNA (proliferating cell nucleolar antigen p120), bound by: RFX1
  • see details about this motif
    • Explore this gene further
  • List all inferred regulatory region structures that include this gene using yakA- data.
  • Look at genes with similar expression patterns and regulatory domain structure.
  • This regulatory region structure was inferred using yakA- gene expression data. Look at structures inferred using other data (click on the panel with the gene expression of interest below).


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