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The regulatory region of rcnA

dictyBase Home >> Chromosome 2:541649..543599 >> Gene: rcnA >> Regulatory Region
Regulatory region snapshot
Description of the computationally inferred structure of gene regulatory sequence elements

Motif appears at position -1000 to -41 relative to the ATG AND
motif appears at position 0 to 39 relative to .

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
AACGGTA|CACCCACCCTC|ACATTTT (rcnA) in sense dir., at pos. -278, p: 8.33e-07

This motif does not match any known binding sites.

Motif appears at these position(s): 
AACGGTA|CACCCACC|CTCACAT (rcnA) in sense dir., at pos. -278, p: 9.68e-08
This motif matches the following known binding sites:
  • CHICK$ADG_04 - GLOB-AD (alphaD-globin)
  • MOUSE$TK_04 - tk (thymidine kinase, cytoplasmic), bound by: Egr-1
  • see details about this motif
    • Explore this gene further
  • List all inferred regulatory region structures that include this gene using yakA- data.
  • Look at genes with similar expression patterns and regulatory domain structure.
  • This regulatory region structure was inferred using yakA- gene expression data. Look at structures inferred using other data (click on the panel with the gene expression of interest below).


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