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Structure of the rcnA regulatory region

Listed is the only one structure of the regulatory region inferred using yakA- gene expression data.

Structure #1

Motif appears at position -1000 to -41 relative to the ATG AND
motif appears at position 0 to 39 relative to .

Detailed description of sequence elements (putative binding sites)
Motif appears at these position(s): 
AACGGTA|CACCCACCCTC|ACATTTT (rcnA) in sense dir., at pos. -278, p: 8.33e-07

This motif does not match any known binding sites.

Motif appears at these position(s): 
AACGGTA|CACCCACC|CTCACAT (rcnA) in sense dir., at pos. -278, p: 9.68e-08
This motif matches the following known binding sites:
  • CHICK$ADG_04 - GLOB-AD (alphaD-globin)
  • MOUSE$TK_04 - tk (thymidine kinase, cytoplasmic), bound by: Egr-1
  • see details about this motif
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