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Dear All,
We are faced with preserving hundreds of clones we have picked up from wild samples and are trying to decide what is the best way to do it. We are aware of methods for lyophilizing samples but this is rather tedious. We plan to use it only for our most valuable samples. We could save spores
in silica, but it is unclear how long this will last. Any thoughts on this or recent protocol modifications would be welcome. It seems like most people freeze cells in HL5 with 10% DMSO. Does this last months or years? Is it necessary to centrifuge the samples and collect the pellet and
resuspend before freezing? Is there a protocol for freezing spores that people have had success with? In principle it seems like spores should be easier to save than cells, but maybe freezing won't work well with them. Any opinions would be welcome.
Dear Dicty Listserv, Here's what I've learned from all you helpful folks. First I give my synthesis and below I append the various emails I received so you can come to your own conclusions. Please let me know if I've made an error. First, save spores not cells if possible. Its easier and more reliable. It lets nature do the work of getting the clones into a preservable form. To do this you bang spores into a petri dish lid, wash them into a cryovial and freeze at -80. These can keep for many years. What you use to wash them into the cryovial is variable. If there really isn't any water left inside the spores, about anything should work. People reported success with phosphate buffer, HL5, milk+glycerol and other combinations. If there is some water lurking in there, maybe quick freezing in liquid nitrogen or a frosty freeze and glycerol in the solution will help. However, I can't see how glycerol could get into the spore to protect it from intracellular ice crystals. Maybe the protein in milk or HL5 offers some extra coating. We plan to use SM and freezing for our clones which all make spores. Soon we'll set up a test of the various methods. If you must save cells a few precautions can make a big difference. First of all, DMSO needs to be fresh and high quality (see detailed email below). The cells need to be highly concentrated and clean. The emails below give the details. Cells emails are first, then spore emails. Thanks again to everyone. Joan CELLS From: "Elizabeth J. Luna" Hi Joan, Two factors that we have found to be important for getting reasonably long-term viability from cells frozen in HL5 with 10% DMSO: 1. The DMSO must be tissu e-culture grade and stored under nitrogen. After exposure to oxygen for prolonged periods, this solvent oxidizes to products that can kill the cells. You want to use tissue-culture grade DMSO from a freshly-broken vial. 2. The cells must be concentrated ("5 x 10^8 cells/ml). This means that you will need to centrifuge axenically-grown cells, which plateau at 10^7 cells/ml. For your wild samples, you also will want to wash away most bacteria before resuspending in a minimal amount of HL5. Dilute suspensions of frozen cells usually die off within weeks to months; concentrated suspensions are good for 1-5 years. For all our really important stocks, we re-make the frozen stocks at least once per year. It would be great if you would let us all know if anyone has better techniques. Good luck, Beth Luna Elizabeth J. Luna, Ph.D. Professor of Cell Biology ---------------------------------------------------
Hi,
Simply collect spores with a platinum loop and suspend in sterile 50%-100% glycerol. After keeping at -70 C for more than five years, they germinate actively when put into HL5 medium. I believe storage at -20 C should (and in a refregerator, maybe) also work fine. Old literatures document the
effect of proteose peptone to facilitate germination, so I think HL-5 is better than buffer.
Dear Joan, Valuable species we lyophilize as well. Routinely we freeze spores as follows. Slam a plate with fruiting bodies right side up to the underside of a table. The majority of spores are now in
the lid. Add 5ml of HL5 to the lid, pipette a few times up and down to resuspend all the spores and freeze in as many aliquots as yo u see fit at -80oC. These spores last for at least 10 years and they
also survived a little mistake of D HL who sent all my cells/spores packed on dry ice by road transport to Italy instead of by air to Dundee when I moved last year. After 10 days at ambient
temperature in summer in Italy and refreezing at -80oC, they still come up fine in Dundee. However, I would not recommend this as a routine procedure and it did not work for the frozen cells.
Good luck, Pauline
Dear Joan
Hi,
Dear Joan- I have been too busy to respond, but let me add a few points. First, we have never used specially stored DMSO, so although that might be a good precaution, I doubt it is necessary. We
switched from phosphate buffered HL5 to Bis-Tris HL5 at the recommendation of a tissue culture lab who claimed that you can get some kind of funny pH effects on long term storage of phosphate
buffered solutions so that you get local pH increases and decreases. Since we switched, we believe our stocks last much longer, but we have no empirical data. For freezing DMSO's we set up the tubes in an ice bucket change the media in the plate to Bis-Tris HL5, harverst and add to tubes, and then place them between two foam 15ml conical tube racks to insulate, tape the two racks together and place the whole rig in the -80 and let slow freeze at least overnight before putting them in boxes. We freeze 0.5-1ml per tube and with various amounts of cells. I haven't seen any evidence you need high cell titer, although we usually have it as we have also frozen low titer cells this way. To revive, we quick thaw and place the contents of a tube into 10mL of HL5 in a dish, and as soon as they are attached of settled, change the media with fresh to get rid of the DMSO.
>For freezing DMSO's we set up the tubes in an ice bucket change the media in the plate to Bis-Tris HL5, harverst and add to tubes, and then place them between two foam 15ml conical tube racks to
>insulate, tape the two racks together and place the whole rig in the -80 and let slow freeze at least overnight before putting them in boxes.
We have found that a "Mr. Frosty" cell freezer gives enormously better viability than this method. Various outfits sell them - you fill them up with isopropanol and they standardize the rate of
cooling. |
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